IL_3UXR_004

3D structure

PDB id

3UXR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus. This file contains the 50S subunit of one 70S ribosome. The entire crystal structure contains two 70S ribosomes.

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GGGAG*CGUGGAUC

Length

13 nucleotides

Bulged bases

3UXR|1|A|G|100

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65553.1

Basepair signature

12_cWW-tSS--tSH-tHW,tHS-tHS,cWW-cWW

Number of instances in this motif group

19

Unit IDs

3UXR|1|A|G|81
3UXR|1|A|G|82
3UXR|1|A|G|83
3UXR|1|A|A|84
3UXR|1|A|G|85
*
3UXR|1|A|C|97
3UXR|1|A|G|98
3UXR|1|A|U|99
3UXR|1|A|G|100
3UXR|1|A|G|102
3UXR|1|A|A|103
3UXR|1|A|U|104
3UXR|1|A|C|105

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L29

Chain Y

50S ribosomal protein L24