IL_3UXR_040
3D structure
- PDB id
- 3UXR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus. This file contains the 50S subunit of one 70S ribosome. The entire crystal structure contains two 70S ribosomes.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GGUAAAG*CGAAAAUGAUCGGGGC
- Length
- 23 nucleotides
- Bulged bases
- 3UXR|1|A|U|1026, 3UXR|1|A|A|1127, 3UXR|1|A|U|1130
- QA status
- QA data not found
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_67697.1
- Basepair signature
- 20_cWW-tWW--tHH-tHS-cWW---------tWH
- Number of instances in this motif group
- 1
Unit IDs
3UXR|1|A|G|1024
3UXR|1|A|G|1025
3UXR|1|A|U|1026
3UXR|1|A|A|1027
3UXR|1|A|A|1028
3UXR|1|A|A|1029
3UXR|1|A|G|1030
*
3UXR|1|A|C|1124
3UXR|1|A|G|1125
3UXR|1|A|A|1126
3UXR|1|A|A|1127
3UXR|1|A|A|1128
3UXR|1|A|A|1129
3UXR|1|A|U|1130
3UXR|1|A|G|1131
3UXR|1|A|A|1132
3UXR|1|A|U|1133
3UXR|1|A|C|1135
3UXR|1|A|G|1136
3UXR|1|A|G|1137
3UXR|1|A|G|1138
3UXR|1|A|G|1139
3UXR|1|A|C|1140
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain B
- 5S ribosomal RNA
- Chain E
- 50S ribosomal protein L3
- Chain N
- 50S ribosomal protein L13
- Chain Q
- 50S ribosomal protein L16
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