IL_3UXR_082

3D structure

PDB id

3UXR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus. This file contains the 50S subunit of one 70S ribosome. The entire crystal structure contains two 70S ribosomes.

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GCGUAGGAUAG*CC

Length

13 nucleotides

Bulged bases

3UXR|1|A|G|2116, 3UXR|1|A|A|2117, 3UXR|1|A|A|2119

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47247.1

Basepair signature

12_cWW----tWH-----cWW

Number of instances in this motif group

2

Unit IDs

3UXR|1|A|G|2110
3UXR|1|A|C|2111
3UXR|1|A|G|2112
3UXR|1|A|U|2113
3UXR|1|A|A|2114
3UXR|1|A|G|2115
3UXR|1|A|G|2116
3UXR|1|A|A|2117
3UXR|1|A|U|2118
3UXR|1|A|A|2119
3UXR|1|A|G|2120
*
3UXR|1|A|C|2178
3UXR|1|A|C|2179

Current chains

Chain A

23S ribosomal RNA

Nearby chains