IL_3UXR_099

3D structure

PDB id

3UXR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus. This file contains the 50S subunit of one 70S ribosome. The entire crystal structure contains two 70S ribosomes.

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CUAGUAC*GGACCG

Length

13 nucleotides

Bulged bases

None detected

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_49493.1

Basepair signature

13_cWW-tSH-tHH-cSH-tWH-tHS-cWW

Number of instances in this motif group

14

Unit IDs

3UXR|1|A|C|2652
3UXR|1|A|U|2653
3UXR|1|A|A|2654
3UXR|1|A|G|2655
3UXR|1|A|U|2656
3UXR|1|A|A|2657
3UXR|1|A|C|2658
*
3UXR|1|A|G|2663
3UXR|1|A|G|2664
3UXR|1|A|A|2665
3UXR|1|A|C|2666
3UXR|1|A|C|2667
3UXR|1|A|G|2668

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain H

50S ribosomal protein L6