IL_4AQY_068

3D structure

PDB id

4AQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome-apramycin complexes

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

AGUUGC*GGCACUCU

Length

14 nucleotides

Bulged bases

4AQY|1|A|U|1125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4AQY|1|A|A|1123
4AQY|1|A|G|1124
4AQY|1|A|U|1125
4AQY|1|A|U|1126
4AQY|1|A|G|1127
4AQY|1|A|C|1128
*
4AQY|1|A|G|1143
4AQY|1|A|G|1144
4AQY|1|A|C|1145
4AQY|1|A|A|1146
4AQY|1|A|C|1147
4AQY|1|A|U|1148
4AQY|1|A|C|1149
4AQY|1|A|U|1150

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain I

30S RIBOSOMAL PROTEIN S9

Chain J

30S RIBOSOMAL PROTEIN S10