IL_4B3M_057
3D structure
- PDB id
- 4B3M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the 30S ribosome in complex with compound 1
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4B3M_057 not in the Motif Atlas
- Geometric match to IL_4ZC7_004
- Geometric discrepancy: 0.1633
- The information below is about IL_4ZC7_004
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_01003.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 174
Unit IDs
4B3M|1|A|G|1405
4B3M|1|A|U|1406
4B3M|1|A|C|1407
*
4B3M|1|A|G|1494
4B3M|1|A|U|1495
4B3M|1|A|C|1496
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain W
- 5'-R(*UP*UP*CP*AP*AP*AP)-3'
- Chain Z
- 5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*CP)-3'
Coloring options: