IL_4B3Q_006

3D structure

PDB id

4B3Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of HIV-1 RT and RNA-DNA Complex Reveal a Unique RT Conformation and Substrate Interface

Experimental method

X-RAY DIFFRACTION

Resolution

5 Å

Loop

Sequence

GTG*CAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4B3Q|1|D|DG|18
4B3Q|1|D|DT|19
4B3Q|1|D|DG|20
*
4B3Q|1|R|C|9
4B3Q|1|R|A|10
4B3Q|1|R|C|11

Current chains

Chain D

PRIMER DNA

Chain R

TEMPLATE RNA

Nearby chains

Chain A

REVERSE TRANSCRIPTASE/RIBONUCLEASE H

Chain B

P51 RT