IL_4B3S_060

3D structure

PDB id

4B3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 30S ribosome in complex with compound 37

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

CUA*UAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: CUA,UAG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4B3S_060 not in the Motif Atlas

Geometric match to IL_4V88_405

Geometric discrepancy: 0.1873

The information below is about IL_4V88_405

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10167.1

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

48

Unit IDs

4B3S|1|A|C|1426
4B3S|1|A|U|1427
4B3S|1|A|A|1428
*
4B3S|1|A|U|1472
4B3S|1|A|A|1473
4B3S|1|A|G|1474

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains