IL_4BPP_017
3D structure
- PDB id
- 4BPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A - Complex 4
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- UAUCAG*CAGUCACG
- Length
- 14 nucleotides
- Bulged bases
- 4BPP|1|A|U|304, 4BPP|1|A|U|342
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65553.12
- Basepair signature
- cWW-cSS-tSS-L-tSH-tSS-tHS-tHW-cWW-tHS-cWW
- Number of instances in this motif group
- 29
Unit IDs
4BPP|1|A|U|302
4BPP|1|A|A|303
4BPP|1|A|U|304
4BPP|1|A|C|305
4BPP|1|A|A|306
4BPP|1|A|G|307
*
4BPP|1|A|C|339
4BPP|1|A|A|340
4BPP|1|A|G|341
4BPP|1|A|U|342
4BPP|1|A|C|343
4BPP|1|A|A|344
4BPP|1|A|C|345
4BPP|1|A|G|346
Current chains
- Chain A
- 18S RRNA
Nearby chains
- Chain 2
- 40S RIBOSOMAL PROTEIN S8
- Chain L
- 40S RIBOSOMAL PROTEIN S12
- Chain Q
- 40S RIBOSOMAL PROTEIN RPS11E
Coloring options: