IL_4BPP_046

3D structure

PDB id

4BPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A - Complex 4

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GUAUU*AGGAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68859.1

Basepair signature

cWW-tSH-cWW-cWS-cWW-cWW

Number of instances in this motif group

16

Unit IDs

4BPP|1|A|G|863
4BPP|1|A|U|864
4BPP|1|A|A|865
4BPP|1|A|U|866
4BPP|1|A|U|867
*
4BPP|1|A|A|901
4BPP|1|A|G|902
4BPP|1|A|G|903
4BPP|1|A|A|904
4BPP|1|A|C|905

Current chains

Chain A

18S RRNA

Nearby chains

Chain 4

40S RIBOSOMAL PROTEIN S3A

Chain 5

40S RIBOSOMAL PROTEIN RPS26E

Chain K

40S RIBOSOMAL PROTEIN RPS14E