IL_4BTS_003

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

UAAA*UGACA

Length

9 nucleotides

Bulged bases

4BTS|1|AA|A|460

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_003 not in the Motif Atlas

Geometric match to IL_5J7L_256

Geometric discrepancy: 0.339

The information below is about IL_5J7L_256

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_09705.15

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

34

Unit IDs

4BTS|1|AA|U|37
4BTS|1|AA|A|38
4BTS|1|AA|A|39
4BTS|1|AA|A|40
*
4BTS|1|AA|U|458
4BTS|1|AA|G|459
4BTS|1|AA|A|460
4BTS|1|AA|C|461
4BTS|1|AA|A|462

Current chains

Chain AA

18S ribosomal RNA

Nearby chains

Chain AD

40S RIBOSOMAL PROTEIN RPS9E

Chain AW

40S RIBOSOMAL PROTEIN RPS4E