IL_4BTS_012

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

CGA*UGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_012 not in the Motif Atlas

Geometric match to IL_3SJ2_001

Geometric discrepancy: 0.1121

The information below is about IL_3SJ2_001

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10167.6

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

51

Unit IDs

4BTS|1|AA|C|144
4BTS|1|AA|G|145
4BTS|1|AA|A|146
*
4BTS|1|AA|U|156
4BTS|1|AA|G|157
4BTS|1|AA|G|158

Current chains

Chain AA

18S ribosomal RNA

Nearby chains

Chain AP

40S RIBOSOMAL PROTEIN S24

Chain AY

40S RIBOSOMAL PROTEIN S6