IL_4BTS_018

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

UCUCGA*UG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_018 not in the Motif Atlas

Geometric match to IL_5Y58_001

Geometric discrepancy: 0.2694

The information below is about IL_5Y58_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_37738.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

4BTS|1|AA|U|309
4BTS|1|AA|C|310
4BTS|1|AA|U|311
4BTS|1|AA|C|312
4BTS|1|AA|G|313
4BTS|1|AA|A|314
*
4BTS|1|AA|U|336
4BTS|1|AA|G|337

Current chains

Chain AA

18S ribosomal RNA

Nearby chains

Chain A2

40S RIBOSOMAL PROTEIN S8

Chain AQ

40S RIBOSOMAL PROTEIN RPS11E