IL_4BTS_040
3D structure
- PDB id
- 4BTS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- AG*CAUU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4BTS_040 not in the Motif Atlas
- Homologous match to IL_4V88_428
- Geometric discrepancy: 0.1196
- The information below is about IL_4V88_428
- Detailed Annotation
- Major groove platform; stack outside cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_50694.4
- Basepair signature
- cWW-cWW-tSH-cWW-R
- Number of instances in this motif group
- 28
Unit IDs
4BTS|1|AA|A|843
4BTS|1|AA|G|844
*
4BTS|1|AA|C|940
4BTS|1|AA|A|941
4BTS|1|AA|U|942
4BTS|1|AA|U|943
Current chains
- Chain AA
- 18S ribosomal RNA
Nearby chains
- Chain A6
- 40S RIBOSOMAL PROTEIN S27
- Chain AH
- 40S RIBOSOMAL PROTEIN RPS22E
- Chain AO
- 40S RIBOSOMAL PROTEIN RPS13E
Coloring options: