IL_4BTS_046

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GGGAUC*GUC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_046 not in the Motif Atlas

Homologous match to IL_4V88_435

Geometric discrepancy: 0.1302

The information below is about IL_4V88_435

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_22046.1

Basepair signature

cWW-L-cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

4BTS|1|AA|G|963
4BTS|1|AA|G|964
4BTS|1|AA|G|965
4BTS|1|AA|A|966
4BTS|1|AA|U|967
4BTS|1|AA|C|968
*
4BTS|1|AA|G|992
4BTS|1|AA|U|993
4BTS|1|AA|C|994

Current chains

Chain AA

18S ribosomal RNA

Nearby chains

Chain AK

40S RIBOSOMAL PROTEIN RPS14E