IL_4BTS_054

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

CAG*CCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_054 not in the Motif Atlas

Geometric match to IL_4J50_003

Geometric discrepancy: 0.1205

The information below is about IL_4J50_003

Detailed Annotation

Isolated cWH basepair

Broad Annotation

Isolated cWH basepair

Motif group

IL_10167.6

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

51

Unit IDs

4BTS|1|AA|C|1126
4BTS|1|AA|A|1127
4BTS|1|AA|G|1128
*
4BTS|1|AA|C|1595
4BTS|1|AA|C|1596
4BTS|1|AA|G|1597

Current chains

Chain AA

18S ribosomal RNA

Nearby chains

Chain A5

40S RIBOSOMAL PROTEIN RPS26E

Chain AE

40S RIBOSOMAL PROTEIN RPS2E