3D structure

PDB id
4BTS (explore in PDB, NAKB, or RNA 3D Hub)
Description
THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
Experimental method
X-RAY DIFFRACTION
Resolution
3.7 Å

Loop

Sequence
AUU*ACU
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4BTS_102 not in the Motif Atlas
Homologous match to IL_4V88_398
Geometric discrepancy: 0.1158
The information below is about IL_4V88_398
Detailed Annotation
Isolated non-canonical cWW pair
Broad Annotation
No text annotation
Motif group
IL_44258.2
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
301

Unit IDs

4BTS|1|BA|A|201
4BTS|1|BA|U|202
4BTS|1|BA|U|203
*
4BTS|1|BA|A|254
4BTS|1|BA|C|255
4BTS|1|BA|U|256

Current chains

Chain BA
18S ribosomal RNA

Nearby chains

Chain B2
40S RIBOSOMAL PROTEIN S8
Chain BW
40S RIBOSOMAL PROTEIN RPS4E

Coloring options:


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