IL_4BTS_118

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GUC*GC

Length

5 nucleotides

Bulged bases

4BTS|1|BA|U|551

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_118 not in the Motif Atlas

Geometric match to IL_2UWM_003

Geometric discrepancy: 0.2743

The information below is about IL_2UWM_003

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_89505.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

117

Unit IDs

4BTS|1|BA|G|550
4BTS|1|BA|U|551
4BTS|1|BA|C|552
*
4BTS|1|BA|G|580
4BTS|1|BA|C|581

Current chains

Chain BA

18S ribosomal RNA

Nearby chains

Chain BC

40S RIBOSOMAL PROTEIN RPS3E

Chain BX

40S RIBOSOMAL PROTEIN RPS30E