IL_4BTS_125

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

UUUC*GUG

Length

7 nucleotides

Bulged bases

4BTS|1|BA|U|648

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_125 not in the Motif Atlas

Geometric match to IL_5WTI_002

Geometric discrepancy: 0.2951

The information below is about IL_5WTI_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_28037.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

65

Unit IDs

4BTS|1|BA|U|647
4BTS|1|BA|U|648
4BTS|1|BA|U|649
4BTS|1|BA|C|650
*
4BTS|1|BA|G|659
4BTS|1|BA|U|660
4BTS|1|BA|G|661

Current chains

Chain BA

18S ribosomal RNA

Nearby chains

Chain BZ

40S RIBOSOMAL PROTEIN RPS21E