IL_4BTS_206

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

CAU*AG

Length

5 nucleotides

Bulged bases

4BTS|1|CA|A|553

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_206 not in the Motif Atlas

Geometric match to IL_5TBW_013

Geometric discrepancy: 0.2549

The information below is about IL_5TBW_013

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

127

Unit IDs

4BTS|1|CA|C|552
4BTS|1|CA|A|553
4BTS|1|CA|U|554
*
4BTS|1|CA|A|579
4BTS|1|CA|G|580

Current chains

Chain CA

18S ribosomal RNA

Nearby chains

Chain CC

40S RIBOSOMAL PROTEIN RPS3E

Chain CL

40S RIBOSOMAL PROTEIN S12

Chain CX

40S RIBOSOMAL PROTEIN RPS30E