IL_4BTS_249

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

UC*GUA

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_249 not in the Motif Atlas

Geometric match to IL_3NKB_002

Geometric discrepancy: 0.1934

The information below is about IL_3NKB_002

Detailed Annotation

Major groove platform

Broad Annotation

No text annotation

Motif group

IL_48076.6

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

41

Unit IDs

4BTS|1|CA|U|1469
4BTS|1|CA|C|1470
*
4BTS|1|CA|G|1479
4BTS|1|CA|U|1480
4BTS|1|CA|A|1481

Current chains

Chain CA

18S ribosomal RNA

Nearby chains

Chain CS

40S RIBOSOMAL PROTEIN RPS15E

Chain CT

40S RIBOSOMAL PROTEIN RPS19E

Chain D4

40S RIBOSOMAL PROTEIN S3A