IL_4BTS_255

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

CGC*GAAG

Length

7 nucleotides

Bulged bases

4BTS|1|CA|A|1709

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_255 not in the Motif Atlas

Geometric match to IL_4WF9_041

Geometric discrepancy: 0.2427

The information below is about IL_4WF9_041

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_57744.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

22

Unit IDs

4BTS|1|CA|C|1616
4BTS|1|CA|G|1617
4BTS|1|CA|C|1618
*
4BTS|1|CA|G|1707
4BTS|1|CA|A|1708
4BTS|1|CA|A|1709
4BTS|1|CA|G|1710

Current chains

Chain CA

18S ribosomal RNA

Nearby chains

Chain C0

TRANSLATION INITIATION FACTOR EIF-1A FAMILY PROTEIN

Chain CF

EIF1

Chain CL

40S RIBOSOMAL PROTEIN S12