3D structure

PDB id
4BTS (explore in PDB, NAKB, or RNA 3D Hub)
Description
THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
Experimental method
X-RAY DIFFRACTION
Resolution
3.7 Å

Loop

Sequence
AGUCAG*CUUGGAUUU
Length
15 nucleotides
Bulged bases
4BTS|1|DA|G|891
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_33229.1
Basepair signature
cWW-cWW-tSH-tWH-tHS-tSS-tSS-R-cWW
Number of instances in this motif group
2

Unit IDs

4BTS|1|DA|A|872
4BTS|1|DA|G|873
4BTS|1|DA|U|874
4BTS|1|DA|C|875
4BTS|1|DA|A|876
4BTS|1|DA|G|877
*
4BTS|1|DA|C|888
4BTS|1|DA|U|889
4BTS|1|DA|U|890
4BTS|1|DA|G|891
4BTS|1|DA|G|892
4BTS|1|DA|A|893
4BTS|1|DA|U|894
4BTS|1|DA|U|895
4BTS|1|DA|U|896

Current chains

Chain DA
18S ribosomal RNA

Nearby chains

Chain CA
Small subunit ribosomal RNA; SSU rRNA
Chain CT
40S RIBOSOMAL PROTEIN RPS19E
Chain D4
40S RIBOSOMAL PROTEIN S3A
Chain DK
40S RIBOSOMAL PROTEIN RPS14E

Coloring options:

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