IL_4BTS_335

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GUAUUUC*GUAAUC

Length

13 nucleotides

Bulged bases

4BTS|1|DA|A|1461, 4BTS|1|DA|U|1463, 4BTS|1|DA|U|1464, 4BTS|1|DA|A|1488, 4BTS|1|DA|U|1489

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_27512.1

Basepair signature

cWW-tSS-cSS-L-cSS-R-L-cWW

Number of instances in this motif group

2

Unit IDs

4BTS|1|DA|G|1459
4BTS|1|DA|U|1460
4BTS|1|DA|A|1461
4BTS|1|DA|U|1462
4BTS|1|DA|U|1463
4BTS|1|DA|U|1464
4BTS|1|DA|C|1465
*
4BTS|1|DA|G|1485
4BTS|1|DA|U|1486
4BTS|1|DA|A|1487
4BTS|1|DA|A|1488
4BTS|1|DA|U|1489
4BTS|1|DA|C|1490

Current chains

Chain DA

18S ribosomal RNA

Nearby chains

Chain DC

40S RIBOSOMAL PROTEIN RPS3E

Chain DJ

40S RIBOSOMAL PROTEIN RPS20E

Chain DN

40S RIBOSOMAL PROTEIN RPS29E

Chain DT

40S RIBOSOMAL PROTEIN RPS19E