IL_4BTS_351

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

AGU*GAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_351 not in the Motif Atlas

Geometric match to IL_5TBW_068

Geometric discrepancy: 0.1651

The information below is about IL_5TBW_068

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

4BTS|1|AA|A|849
4BTS|1|AA|G|850
4BTS|1|AA|U|851
*
4BTS|1|AA|G|932
4BTS|1|AA|A|933
4BTS|1|AA|U|934

Current chains

Chain AA

18S ribosomal RNA

Nearby chains

Chain A4

40S RIBOSOMAL PROTEIN S3A

Chain A6

40S RIBOSOMAL PROTEIN S27

Chain AO

40S RIBOSOMAL PROTEIN RPS13E