3D structure

PDB id
4BTS (explore in PDB, NAKB, or RNA 3D Hub)
Description
THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
Experimental method
X-RAY DIFFRACTION
Resolution
3.7 Å

Loop

Sequence
GCGCAAAAA*UUAUUAAUAC
Length
19 nucleotides
Bulged bases
4BTS|1|BA|G|1452, 4BTS|1|BA|A|1493, 4BTS|1|BA|U|1495
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4BTS|1|BA|G|1450
4BTS|1|BA|C|1451
4BTS|1|BA|G|1452
4BTS|1|BA|C|1453
4BTS|1|BA|A|1454
4BTS|1|BA|A|1455
4BTS|1|BA|A|1456
4BTS|1|BA|A|1457
4BTS|1|BA|A|1458
*
4BTS|1|BA|U|1491
4BTS|1|BA|U|1492
4BTS|1|BA|A|1493
4BTS|1|BA|U|1494
4BTS|1|BA|U|1495
4BTS|1|BA|A|1496
4BTS|1|BA|A|1497
4BTS|1|BA|U|1498
4BTS|1|BA|A|1499
4BTS|1|BA|C|1500

Current chains

Chain BA
18S ribosomal RNA

Nearby chains

Chain B8
40S RIBOSOMAL PROTEIN RPS25E
Chain BC
40S RIBOSOMAL PROTEIN RPS3E
Chain BG
40S RIBOSOMAL PROTEIN RPS5E
Chain BI
40S RIBOSOMAL PROTEIN RPS16E
Chain BJ
40S RIBOSOMAL PROTEIN RPS20E
Chain BN
40S RIBOSOMAL PROTEIN RPS29E
Chain BT
40S RIBOSOMAL PROTEIN RPS19E

Coloring options:

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