3D structure

PDB id
4BTS (explore in PDB, NAKB, or RNA 3D Hub)
Description
THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
Experimental method
X-RAY DIFFRACTION
Resolution
3.7 Å

Loop

Sequence
AAGGGAUUG*CUUGAUU
Length
16 nucleotides
Bulged bases
4BTS|1|CA|G|1200
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4BTS|1|CA|A|1197
4BTS|1|CA|A|1198
4BTS|1|CA|G|1199
4BTS|1|CA|G|1200
4BTS|1|CA|G|1201
4BTS|1|CA|A|1202
4BTS|1|CA|U|1203
4BTS|1|CA|U|1204
4BTS|1|CA|G|1205
*
4BTS|1|CA|C|1224
4BTS|1|CA|U|1225
4BTS|1|CA|U|1226
4BTS|1|CA|G|1227
4BTS|1|CA|A|1228
4BTS|1|CA|U|1229
4BTS|1|CA|U|1230

Current chains

Chain CA
18S ribosomal RNA

Nearby chains

Chain C7
40S RIBOSOMAL PROTEIN RPS10E
Chain C9
40S RIBOSOMAL PROTEIN RPS31E
Chain CN
40S RIBOSOMAL PROTEIN RPS29E
Chain CU
40S RIBOSOMAL PROTEIN RPS12E

Coloring options:

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