IL_4BTS_381

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GAA*UAGC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_381 not in the Motif Atlas

Homologous match to IL_8P9A_400

Geometric discrepancy: 0.1566

The information below is about IL_8P9A_400

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_90351.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

8

Unit IDs

4BTS|1|AA|G|509
4BTS|1|AA|A|510
4BTS|1|AA|A|511
*
4BTS|1|AA|U|526
4BTS|1|AA|A|527
4BTS|1|AA|G|528
4BTS|1|AA|C|529

Current chains

Chain AA

18S ribosomal RNA

Nearby chains

Chain AD

40S RIBOSOMAL PROTEIN RPS9E

Chain AP

40S RIBOSOMAL PROTEIN S24

Chain CU

40S RIBOSOMAL PROTEIN RPS12E