IL_4BTS_387

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

ACUA*UUCU

Length

8 nucleotides

Bulged bases

4BTS|1|BA|C|1318, 4BTS|1|BA|U|1319

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_387 not in the Motif Atlas

Homologous match to IL_8P9A_445

Geometric discrepancy: 0.219

The information below is about IL_8P9A_445

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_78800.1

Basepair signature

cWW-cSH-L-cWW

Number of instances in this motif group

2

Unit IDs

4BTS|1|BA|A|1317
4BTS|1|BA|C|1318
4BTS|1|BA|U|1319
4BTS|1|BA|A|1320
*
4BTS|1|BA|U|1347
4BTS|1|BA|U|1348
4BTS|1|BA|C|1349
4BTS|1|BA|U|1350

Current chains

Chain BA

18S ribosomal RNA

Nearby chains

Chain BI

40S RIBOSOMAL PROTEIN RPS16E

Chain BJ

40S RIBOSOMAL PROTEIN RPS20E

Chain BR

40S RIBOSOMAL PROTEIN RACK1