IL_4C7O_002

3D structure

PDB id

4C7O (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structural basis of FtsY recruitment and GTPase activation by SRP RNA

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

CU*AUG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Single stack bend

Broad Annotation

Single stack bend

Motif group

IL_06586.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

36

Unit IDs

4C7O|1|E|C|8
4C7O|1|E|U|9
*
4C7O|1|E|A|36
4C7O|1|E|U|37
4C7O|1|E|G|38

Current chains

Chain E

SRP RNA

Nearby chains

Chain B

SIGNAL RECOGNITION PARTICLE RECEPTOR FTSY