IL_4DR1_070

3D structure

PDB id

4DR1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the apo 30S ribosomal subunit from Thermus thermophilus (HB8)

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

UAGGGAACCCG*UGGGGUGCCCCGCGAGGGGAGCCCUA

Length

37 nucleotides

Bulged bases

4DR1|1|A|A|1005

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4DR1|1|A|U|1000
4DR1|1|A|A|1001
4DR1|1|A|G|1002
4DR1|1|A|G|1003
4DR1|1|A|G|1003|||A
4DR1|1|A|A|1004
4DR1|1|A|A|1005
4DR1|1|A|C|1006
4DR1|1|A|C|1007
4DR1|1|A|C|1008
4DR1|1|A|G|1009
*
4DR1|1|A|U|1020
4DR1|1|A|G|1021
4DR1|1|A|G|1022
4DR1|1|A|G|1023
4DR1|1|A|G|1024
4DR1|1|A|U|1025
4DR1|1|A|G|1026
4DR1|1|A|C|1027
4DR1|1|A|C|1028
4DR1|1|A|C|1029
4DR1|1|A|C|1030
4DR1|1|A|G|1030|||A
4DR1|1|A|C|1030|||B
4DR1|1|A|G|1030|||C
4DR1|1|A|A|1030|||D
4DR1|1|A|G|1031
4DR1|1|A|G|1032
4DR1|1|A|G|1033
4DR1|1|A|G|1034
4DR1|1|A|A|1035
4DR1|1|A|G|1036
4DR1|1|A|C|1037
4DR1|1|A|C|1038
4DR1|1|A|C|1039
4DR1|1|A|U|1040
4DR1|1|A|A|1041

Current chains

Chain A

16S rRNA

Nearby chains