IL_4DR3_049

3D structure

PDB id

4DR3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with streptomycin bound

Experimental method

X-RAY DIFFRACTION

Resolution

3.35 Å

Loop

Sequence

AGUUGC*GGCACUCU

Length

14 nucleotides

Bulged bases

4DR3|1|A|U|1125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4DR3|1|A|A|1123
4DR3|1|A|G|1124
4DR3|1|A|U|1125
4DR3|1|A|U|1126
4DR3|1|A|G|1127
4DR3|1|A|C|1128
*
4DR3|1|A|G|1143
4DR3|1|A|G|1144
4DR3|1|A|C|1145
4DR3|1|A|A|1146
4DR3|1|A|C|1147
4DR3|1|A|U|1148
4DR3|1|A|C|1149
4DR3|1|A|U|1150

Current chains

Chain A

16S rRNA

Nearby chains

Chain I

30S ribosomal protein S9

Chain J

30S ribosomal protein S10