IL_4DS6_016

3D structure

PDB id

4DS6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a group II intron in the pre-catalytic state

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

AUAUGAGG*UAAAU

Length

13 nucleotides

Bulged bases

4DS6|1|A|U|152, 4DS6|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4DS6|1|A|A|149
4DS6|1|A|U|150
4DS6|1|A|A|151
4DS6|1|A|U|152
4DS6|1|A|G|153
4DS6|1|A|A|154
4DS6|1|A|G|155
4DS6|1|A|G|156
*
4DS6|1|A|U|221
4DS6|1|A|A|222
4DS6|1|A|A|223
4DS6|1|A|A|224
4DS6|1|A|U|225

Current chains

Chain A

Mutant Group IIC Intron

Nearby chains