3D structure

PDB id
4DUZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, U13C, bound with streptomycin
Experimental method
X-RAY DIFFRACTION
Resolution
3.65 Å

Loop

Sequence
GCUAGGGAACCCGGG*CCUGGGGUGCCCCGCGAGGGGAGCCCUAGC
Length
45 nucleotides
Bulged bases
4DUZ|1|A|U|1025
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4DUZ|1|A|G|998
4DUZ|1|A|C|999
4DUZ|1|A|U|1000
4DUZ|1|A|A|1001
4DUZ|1|A|G|1002
4DUZ|1|A|G|1003
4DUZ|1|A|G|1003|||A
4DUZ|1|A|A|1004
4DUZ|1|A|A|1005
4DUZ|1|A|C|1006
4DUZ|1|A|C|1007
4DUZ|1|A|C|1008
4DUZ|1|A|G|1009
4DUZ|1|A|G|1010
4DUZ|1|A|G|1011
*
4DUZ|1|A|C|1018
4DUZ|1|A|C|1019
4DUZ|1|A|U|1020
4DUZ|1|A|G|1021
4DUZ|1|A|G|1022
4DUZ|1|A|G|1023
4DUZ|1|A|G|1024
4DUZ|1|A|U|1025
4DUZ|1|A|G|1026
4DUZ|1|A|C|1027
4DUZ|1|A|C|1028
4DUZ|1|A|C|1029
4DUZ|1|A|C|1030
4DUZ|1|A|G|1030|||A
4DUZ|1|A|C|1030|||B
4DUZ|1|A|G|1030|||C
4DUZ|1|A|A|1030|||D
4DUZ|1|A|G|1031
4DUZ|1|A|G|1032
4DUZ|1|A|G|1033
4DUZ|1|A|G|1034
4DUZ|1|A|A|1035
4DUZ|1|A|G|1036
4DUZ|1|A|C|1037
4DUZ|1|A|C|1038
4DUZ|1|A|C|1039
4DUZ|1|A|U|1040
4DUZ|1|A|A|1041
4DUZ|1|A|G|1042
4DUZ|1|A|C|1043

Current chains

Chain A
16S rRNA

Nearby chains

Chain N
ribosomal protein S14
Chain S
ribosomal protein S19

Coloring options:

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