IL_4DV0_070

3D structure

PDB id

4DV0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, U20G

Experimental method

X-RAY DIFFRACTION

Resolution

3.85 Å

Loop

Sequence

CCUACC*GAUGG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4DV0|1|A|C|131
4DV0|1|A|C|132
4DV0|1|A|U|133
4DV0|1|A|A|134
4DV0|1|A|C|135
4DV0|1|A|C|136
*
4DV0|1|A|G|227
4DV0|1|A|A|228
4DV0|1|A|U|229
4DV0|1|A|G|230
4DV0|1|A|G|231

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

ribosomal protein S16

Chain Q

ribosomal protein S17

Chain T

ribosomal protein S20