IL_4DV2_045

3D structure

PDB id

4DV2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, C912A

Experimental method

X-RAY DIFFRACTION

Resolution

3.65 Å

Loop

Sequence

GCUGCAU*AUG(2MG)C

Length

12 nucleotides

Bulged bases

4DV2|1|A|G|1053, 4DV2|1|A|C|1054

QA status

Modified nucleotides: 2MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4DV2|1|A|G|1050
4DV2|1|A|C|1051
4DV2|1|A|U|1052
4DV2|1|A|G|1053
4DV2|1|A|C|1054
4DV2|1|A|A|1055
4DV2|1|A|U|1056
*
4DV2|1|A|A|1204
4DV2|1|A|U|1205
4DV2|1|A|G|1206
4DV2|1|A|2MG|1207
4DV2|1|A|C|1208

Current chains

Chain A

16S rRNA

Nearby chains

Chain C

ribosomal protein S3

Chain J

ribosomal protein S10

Chain N

ribosomal protein S14