IL_4DV2_063

3D structure

PDB id

4DV2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, C912A

Experimental method

X-RAY DIFFRACTION

Resolution

3.65 Å

Loop

Sequence

CCAUGG*CUGGGG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4DV2|1|A|C|1411
4DV2|1|A|C|1412
4DV2|1|A|A|1413
4DV2|1|A|U|1414
4DV2|1|A|G|1415
4DV2|1|A|G|1416
*
4DV2|1|A|C|1484
4DV2|1|A|U|1485
4DV2|1|A|G|1486
4DV2|1|A|G|1487
4DV2|1|A|G|1488
4DV2|1|A|G|1489

Current chains

Chain A

16S rRNA

Nearby chains

Chain L

ribosomal protein S12