IL_4DV2_085

3D structure

PDB id

4DV2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, C912A

Experimental method

X-RAY DIFFRACTION

Resolution

3.65 Å

Loop

Sequence

AGGGAACCC*GGGGUGCCCCGCGAGGGGAGCCCU

Length

33 nucleotides

Bulged bases

4DV2|1|A|U|1025

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4DV2|1|A|A|1001
4DV2|1|A|G|1002
4DV2|1|A|G|1003
4DV2|1|A|G|1003|||A
4DV2|1|A|A|1004
4DV2|1|A|A|1005
4DV2|1|A|C|1006
4DV2|1|A|C|1007
4DV2|1|A|C|1008
*
4DV2|1|A|G|1021
4DV2|1|A|G|1022
4DV2|1|A|G|1023
4DV2|1|A|G|1024
4DV2|1|A|U|1025
4DV2|1|A|G|1026
4DV2|1|A|C|1027
4DV2|1|A|C|1028
4DV2|1|A|C|1029
4DV2|1|A|C|1030
4DV2|1|A|G|1030|||A
4DV2|1|A|C|1030|||B
4DV2|1|A|G|1030|||C
4DV2|1|A|A|1030|||D
4DV2|1|A|G|1031
4DV2|1|A|G|1032
4DV2|1|A|G|1033
4DV2|1|A|G|1034
4DV2|1|A|A|1035
4DV2|1|A|G|1036
4DV2|1|A|C|1037
4DV2|1|A|C|1038
4DV2|1|A|C|1039
4DV2|1|A|U|1040

Current chains

Chain A

16S rRNA

Nearby chains