IL_4DV3_047

3D structure

PDB id

4DV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, C912A, bound with streptomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.55 Å

Loop

Sequence

UAGUUGC*GGCACUCUA

Length

16 nucleotides

Bulged bases

4DV3|1|A|U|1125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4DV3|1|A|U|1122
4DV3|1|A|A|1123
4DV3|1|A|G|1124
4DV3|1|A|U|1125
4DV3|1|A|U|1126
4DV3|1|A|G|1127
4DV3|1|A|C|1128
*
4DV3|1|A|G|1143
4DV3|1|A|G|1144
4DV3|1|A|C|1145
4DV3|1|A|A|1146
4DV3|1|A|C|1147
4DV3|1|A|U|1148
4DV3|1|A|C|1149
4DV3|1|A|U|1150
4DV3|1|A|A|1151

Current chains

Chain A

16S rRNA

Nearby chains

Chain I

ribosomal protein S9

Chain J

ribosomal protein S10