IL_4DV4_059

3D structure

PDB id

4DV4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, A914G

Experimental method

X-RAY DIFFRACTION

Resolution

3.65 Å

Loop

Sequence

GU(5MC)ACG*CGAAGUC

Length

13 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 5MC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4DV4|1|A|G|1405
4DV4|1|A|U|1406
4DV4|1|A|5MC|1407
4DV4|1|A|A|1408
4DV4|1|A|C|1409
4DV4|1|A|G|1410
*
4DV4|1|A|C|1490
4DV4|1|A|G|1491
4DV4|1|A|A|1492
4DV4|1|A|A|1493
4DV4|1|A|G|1494
4DV4|1|A|U|1495
4DV4|1|A|C|1496

Current chains

Chain A

16S rRNA

Nearby chains

Chain L

ribosomal protein S12