3D structure

PDB id
4DV6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, A915G
Experimental method
X-RAY DIFFRACTION
Resolution
3.3 Å

Loop

Sequence
GUUGCCAGCG*CGGGCACUC
Length
19 nucleotides
Bulged bases
4DV6|1|A|U|1125
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4DV6|1|A|G|1124
4DV6|1|A|U|1125
4DV6|1|A|U|1126
4DV6|1|A|G|1127
4DV6|1|A|C|1128
4DV6|1|A|C|1129
4DV6|1|A|A|1130
4DV6|1|A|G|1131
4DV6|1|A|C|1132
4DV6|1|A|G|1133
*
4DV6|1|A|C|1141
4DV6|1|A|G|1142
4DV6|1|A|G|1143
4DV6|1|A|G|1144
4DV6|1|A|C|1145
4DV6|1|A|A|1146
4DV6|1|A|C|1147
4DV6|1|A|U|1148
4DV6|1|A|C|1149

Current chains

Chain A
16S rRNA

Nearby chains

Chain I
ribosomal protein S9
Chain J
ribosomal protein S10

Coloring options:

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