IL_4DV7_061

3D structure

PDB id

4DV7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, A915G, bound with streptomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.29 Å

Loop

Sequence

GAAACCCC*GGGACUGAC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4DV7_061 not in the Motif Atlas

Homologous match to IL_6CZR_360

Geometric discrepancy: 0.2366

The information below is about IL_6CZR_360

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4DV7|1|A|G|450
4DV7|1|A|A|451
4DV7|1|A|A|452
4DV7|1|A|A|453
4DV7|1|A|C|454
4DV7|1|A|C|455
4DV7|1|A|C|456
4DV7|1|A|C|457
*
4DV7|1|A|G|475
4DV7|1|A|G|476
4DV7|1|A|G|477
4DV7|1|A|A|478
4DV7|1|A|C|479
4DV7|1|A|U|480
4DV7|1|A|G|481
4DV7|1|A|A|482
4DV7|1|A|C|483

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

ribosomal protein S16