IL_4E59_003

3D structure

PDB id

4E59 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of GCCGCCGC duplex

Experimental method

X-RAY DIFFRACTION

Resolution

1.54 Å

Loop

Sequence

CCG*CCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01312.11

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

279

Unit IDs

4E59|1|A|C|2||||3_555
4E59|1|A|C|3||||3_555
4E59|1|A|G|4||||3_555
*
4E59|1|B|C|2||||3_555
4E59|1|B|C|3||||3_555
4E59|1|B|G|4||||3_555

Current chains

Chain A

RNA duplex containing CCG repeats

Chain B

RNA duplex containing CCG repeats

Nearby chains