IL_4E8R_010

3D structure

PDB id

4E8R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Cs+ and Mg2+

Experimental method

X-RAY DIFFRACTION

Resolution

3.36 Å

Loop

Sequence

GAGGUC*GAAGUC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4E8R|1|A|G|267
4E8R|1|A|A|268
4E8R|1|A|G|269
4E8R|1|A|G|270
4E8R|1|A|U|271
4E8R|1|A|C|272
*
4E8R|1|A|G|281
4E8R|1|A|A|282
4E8R|1|A|A|283
4E8R|1|A|G|284
4E8R|1|A|U|285
4E8R|1|A|C|286

Current chains

Chain A

Group IIC intron

Nearby chains