IL_4ERJ_002

3D structure

PDB id

4ERJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the lysine riboswitch bound to a 6-aminocaproic acid

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGAG*CGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4ERJ_002 not in the Motif Atlas

Homologous match to IL_4ERL_002

Geometric discrepancy: 0.0482

The information below is about IL_4ERL_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4ERJ|1|A|C|16
4ERJ|1|A|G|17
4ERJ|1|A|A|18
4ERJ|1|A|G|19
*
4ERJ|1|A|C|67
4ERJ|1|A|G|68
4ERJ|1|A|A|69
4ERJ|1|A|G|70

Current chains

Chain A

Lysine riboswitch RNA

Nearby chains