IL_4FAQ_016

3D structure

PDB id

4FAQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and 5'-exon

Experimental method

X-RAY DIFFRACTION

Resolution

3.11 Å

Loop

Sequence

AUG*CUUUCUGCCAAAGU

Length

17 nucleotides

Bulged bases

4FAQ|1|A|C|205, 4FAQ|1|A|A|206, 4FAQ|1|A|A|207

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4FAQ|1|A|A|167
4FAQ|1|A|U|168
4FAQ|1|A|G|169
*
4FAQ|1|A|C|197
4FAQ|1|A|U|198
4FAQ|1|A|U|199
4FAQ|1|A|U|200
4FAQ|1|A|C|201
4FAQ|1|A|U|202
4FAQ|1|A|G|203
4FAQ|1|A|C|204
4FAQ|1|A|C|205
4FAQ|1|A|A|206
4FAQ|1|A|A|207
4FAQ|1|A|A|208
4FAQ|1|A|G|209
4FAQ|1|A|U|210

Current chains

Chain A

Group IIC intron

Nearby chains