IL_4FAR_003
3D structure
- PDB id
- 4FAR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and 5'-exon
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.86 Å
Loop
- Sequence
- CAAG*UGAAGGAAG
- Length
- 13 nucleotides
- Bulged bases
- 4FAR|1|A|A|106, 4FAR|1|A|G|107
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4FAR_003 not in the Motif Atlas
- Homologous match to IL_5J02_003
- Geometric discrepancy: 0.0862
- The information below is about IL_5J02_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4FAR|1|A|C|76
4FAR|1|A|A|77
4FAR|1|A|A|78
4FAR|1|A|G|79
*
4FAR|1|A|U|103
4FAR|1|A|G|104
4FAR|1|A|A|105
4FAR|1|A|A|106
4FAR|1|A|G|107
4FAR|1|A|G|108
4FAR|1|A|A|109
4FAR|1|A|A|110
4FAR|1|A|G|111
Current chains
- Chain A
- Group IIC intron
Nearby chains
- Chain B
- Group IIC intron
Coloring options: