IL_4JI1_067

3D structure

PDB id

4JI1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

GUUGCCAGCG*CGGGCACUC

Length

19 nucleotides

Bulged bases

4JI1|1|A|U|1125, 4JI1|1|A|U|1126, 4JI1|1|A|C|1129

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4JI1|1|A|G|1124
4JI1|1|A|U|1125
4JI1|1|A|U|1126
4JI1|1|A|G|1127
4JI1|1|A|C|1128
4JI1|1|A|C|1129
4JI1|1|A|A|1130
4JI1|1|A|G|1131
4JI1|1|A|C|1132
4JI1|1|A|G|1133
*
4JI1|1|A|C|1141
4JI1|1|A|G|1142
4JI1|1|A|G|1143
4JI1|1|A|G|1144
4JI1|1|A|C|1145
4JI1|1|A|A|1146
4JI1|1|A|C|1147
4JI1|1|A|U|1148
4JI1|1|A|C|1149

Current chains

Chain A

16S rRNA

Nearby chains

Chain I

RIBOSOMAL PROTEIN S9

Chain J

RIBOSOMAL PROTEIN S10