IL_4JI2_018
3D structure
- PDB id
- 4JI2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.64 Å
Loop
- Sequence
- GCAAU*AC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4JI2_018 not in the Motif Atlas
- Geometric match to IL_4LFB_015
- Geometric discrepancy: 0.1284
- The information below is about IL_4LFB_015
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_03109.3
- Basepair signature
- cWW-cWS-tWH-cWW-L
- Number of instances in this motif group
- 6
Unit IDs
4JI2|1|A|G|371
4JI2|1|A|C|372
4JI2|1|A|A|373
4JI2|1|A|A|374
4JI2|1|A|U|375
*
4JI2|1|A|A|389
4JI2|1|A|C|390
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain P
- RIBOSOMAL PROTEIN S16
Coloring options: