IL_4JI2_062

3D structure

PDB id

4JI2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

GU(5MC)ACGC*GCGAAGUC

Length

15 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 5MC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4JI2|1|A|G|1405
4JI2|1|A|U|1406
4JI2|1|A|5MC|1407
4JI2|1|A|A|1408
4JI2|1|A|C|1409
4JI2|1|A|G|1410
4JI2|1|A|C|1411
*
4JI2|1|A|G|1489
4JI2|1|A|C|1490
4JI2|1|A|G|1491
4JI2|1|A|A|1492
4JI2|1|A|A|1493
4JI2|1|A|G|1494
4JI2|1|A|U|1495
4JI2|1|A|C|1496

Current chains

Chain A

16S rRNA

Nearby chains

Chain L

RIBOSOMAL PROTEIN S12